| Title: | 'shiny' Application for Statistical Test Assumption Checking and Guidance |
|---|---|
| Description: | A 'shiny' application to assess statistical assumptions and guide users toward appropriate tests. The app is designed for researchers with minimal statistical training and provides diagnostics, plots, and test recommendations for a wide range of analyses. Many statistical assumptions are implemented using the package 'rstatix' (Kassambara, 2019) <doi:10.32614/CRAN.package.rstatix> and 'performance' (Lüdecke et al., 2021) <doi:10.21105/joss.03139>. |
| Authors: | Ahmed Bargheet [aut, cre] |
| Maintainer: | Ahmed Bargheet <[email protected]> |
| License: | GPL-3 |
| Version: | 1.1.4 |
| Built: | 2026-05-26 07:21:24 UTC |
| Source: | https://github.com/ahmedbargheet/assumpsure |
A small synthetic dataset included with AssumpSure for demonstrating correlation analysis of the compositional data in the Correlation tab.
A CSV file with 126 rows and 21 columns:
Sample identifier.
Relative abundance of Bifidobacterium longum.
Relative abundance of Escherichia coli.
Relative abundance of Bifidobacterium bifidum.
Relative abundance of Bifidobacterium breve.
Relative abundance of Klebsiella pneumoniae.
Relative abundance of Streptococcus salivarius.
Relative abundance of Streptococcus lactarius.
Relative abundance of Enterococcus faecium.
Relative abundance of Streptococcus mitis.
Relative abundance of Streptococcus peroris.
Relative abundance of Streptococcus pneumoniae.
Relative abundance of Streptococcus lutetiensis.
Relative abundance of Klebsiella variicola.
Relative abundance of Bacteroides fragilis.
Relative abundance of Streptococcus equinus.
Relative abundance of Clostridium species.
Relative abundance of Peptoniphilus cumminsii.
Relative abundance of Trueperella bernardiae.
Relative abundance of Corynebacterium simulans.
Relative abundance of Granulicatella sp. SGB61413.
The file is stored in inst/extdata/bacteria_for_correlation.csv.
All values are synthetic, created only for demonstration; no human data were used, and no ethical approval or consent is required.
Simulated data generated by the author.
read.csv(system.file("extdata", "bacteria_for_correlation.csv", package = "AssumpSure"))read.csv(system.file("extdata", "bacteria_for_correlation.csv", package = "AssumpSure"))
A small synthetic dataset included with AssumpSure for demonstrating Fisher & Chi-square tests in the Fisher & Chi-square tab.
A CSV file with 101 rows and 2 columns:
Sex.
Location.
The file is stored in inst/extdata/chi_fisher.csv.
All values are synthetic, created only for demonstration; no human data were used, and no ethical approval or consent is required.
Simulated data generated by the author.
read.csv(system.file("extdata", "chi_fisher.csv", package = "AssumpSure"))read.csv(system.file("extdata", "chi_fisher.csv", package = "AssumpSure"))
A small synthetic dataset included with AssumpSure for demonstrating correlation analysis in the Correlation tab.
A CSV file with 33 rows and 12 columns:
Sample identifier.
Miles per gallon.
Number of cylinders.
Displacement (cu. in.).
Gross horsepower.
Rear axle ratio.
Weight (1000 lbs).
1/4 mile time.
Engine shape (0 = V-shaped, 1 = straight).
Transmission (0 = automatic, 1 = manual).
Number of forward gears.
Number of carburetors.
The file is stored in inst/extdata/correlation.csv.
All values are synthetic, created only for demonstration; no human data were used, and no ethical approval or consent is required.
Simulated data generated by the author.
read.csv(system.file("extdata", "correlation.csv", package = "AssumpSure"))read.csv(system.file("extdata", "correlation.csv", package = "AssumpSure"))
A simulated dataset included with the AssumpSure package and used by the Shiny app for demonstration and testing.
A CSV file with 251 rows and 12 columns:
Participant identifier.
Treatment group.
Measurement time point.
Participant gender.
Method of delivery.
Participant country.
Whether the participant received fortification.
Whether the participant received nutrients.
Whether the participant experienced diarrhea.
Participant weight.
Bacterial richness count.
Participant height.
The file is stored in inst/extdata/infants.csv and can be accessed with:
system.file("extdata", "infants.csv", package = "AssumpSure").
All values are synthetic, created only for demonstration; no human data were used, and no ethical approval or consent is required.
Simulated data generated by the author.
read.csv(system.file("extdata", "infants.csv", package = "AssumpSure"))read.csv(system.file("extdata", "infants.csv", package = "AssumpSure"))
Launch the AssumpSure Shiny App
launch_app()launch_app()
Runs the Shiny app.
if (interactive()) { launch_app() }if (interactive()) { launch_app() }
A small synthetic dataset included with AssumpSure for demonstrating one-way ANOVA in the Continuous Data Tests tab.
A CSV file with 31 rows and 2 columns:
Plant weight.
Treatment group.
The file is stored in inst/extdata/plantgrowth.csv.
All values are synthetic, created only for demonstration; no human data were used, and no ethical approval or consent is required.
Simulated data generated by the author.
read.csv(system.file("extdata", "plantgrowth.csv", package = "AssumpSure"))read.csv(system.file("extdata", "plantgrowth.csv", package = "AssumpSure"))
A small synthetic dataset included with AssumpSure for demonstrating independent and paired t-tests in the Continuous Data Tests tab.
A CSV file with 85 rows and 5 columns:
Plant number.
Treatment group.
Treatment type.
Treatment concentration.
Uptake value.
The file is stored in inst/extdata/t-test.csv.
All values are synthetic, created only for demonstration; no human data were used, and no ethical approval or consent is required.
Simulated data generated by the author.
read.csv(system.file("extdata", "t-test.csv", package = "AssumpSure"))read.csv(system.file("extdata", "t-test.csv", package = "AssumpSure"))